Version 5.4
Mus musculus Gene: Cdx4
Summary
InnateDB Gene IDBG-165732.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cdx4
Gene Name caudal type homeobox 4
Synonyms Cdx-3; Cdx-4; Cdx3
Species Mus musculus
Ensembl Gene ENSMUSG00000031326
Encoded Proteins
IDBP-165734
caudal type homeobox 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000131264:
This gene encodes a member of a small subfamily of homeobox containing transcription factors. The encoded protein may regulate homeobox gene expression during anteroposterior patterning and hematopoiesis. [provided by RefSeq, Aug 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome X:103321398-103330592
Strand Forward strand
Band D
Transcripts
ENSMUST00000033689 ENSMUSP00000033689
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000976 transcription regulatory region sequence-specific DNA binding
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0001568 blood vessel development
GO:0001890 placenta development
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007275 multicellular organismal development
GO:0009952 anterior/posterior pattern specification
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0060711 labyrinthine layer development
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000131264
View Gene Order
ENSBTAG00000001726
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
INOH
PID NCI
betacatenin_nuc_pathway
Regulation of nuclear beta catenin signaling and target gene transcription
Cross-References
SwissProt Q07424
TrEMBL Q3UR92 Q78Z64
UniProt Splice Variant
Entrez Gene 12592
UniGene Mm.4353
RefSeq NM_007674
OMIM
CCDS CCDS30328
HPRD
IMGT
MGI ID MGI:88362
MGI Symbol Cdx4
EMBL AJ421480 AK141681 BC119158 CH466564 L08061
GenPept AAA16901 AAI19159 BAE24796 CAD33953 EDL14108
RNA Seq Atlas 12592

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca