Version 5.4
Mus musculus Gene: Slitrk1
Summary
InnateDB Gene IDBG-185900.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Slitrk1
Gene Name SLIT and NTRK-like family, member 1
Synonyms 3200001I04Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000075478
Encoded Proteins
IDBP-185902
SLIT and NTRK-like family, member 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000178235:
This intronless gene encodes a member of the SLITRK protein family. These proteins are integral membrane proteins that are characterized by two N-terminal leucine-rich repeat (LRR) domains and a C-terminal region that shares homology with trk neurotrophin receptors. However, the protein encoded by this gene lacks the region of homology to neurotrophin receptors. The protein is thought to be involved in neurite outgrowth. Mutations in this gene may be associated with Tourette syndrome.[provided by RefSeq, Mar 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:108909991-108914239
Strand Reverse strand
Band E3
Transcripts
ENSMUST00000100322 ENSMUSP00000097897
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0007399 nervous system development
GO:0007409 axonogenesis
GO:0030534 adult behavior
GO:0035264 multicellular organism growth
GO:0042592 homeostatic process
Cellular Component
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000178235
View Gene Order
ENSBTAG00000038168
Not yet available
Cross-References
SwissProt Q810C1
TrEMBL B2RXM1 Q69Z70
UniProt Splice Variant
Entrez Gene 76965
UniGene Mm.257268 Mm.403696
RefSeq NM_199065
OMIM
CCDS CCDS27325
HPRD
IMGT
MGI ID MGI:2679446
MGI Symbol Slitrk1
EMBL AB097570 AK014285 AK173296 BC157902 CH466544
GenPept AAI57903 BAB29244 BAC67204 BAD32574 EDL00537
RNA Seq Atlas 76965

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca