Version 5.4
Mus musculus Gene: Adat1
Summary
InnateDB Gene IDBG-193802.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Adat1
Gene Name adenosine deaminase, tRNA-specific 1
Synonyms mADAT1; MMADAT1
Species Mus musculus
Ensembl Gene ENSMUSG00000031949
Encoded Proteins
IDBP-193804
adenosine deaminase, tRNA-specific 1
IDBP-400442
adenosine deaminase, tRNA-specific 1
IDBP-531705
adenosine deaminase, tRNA-specific 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000065457:
This gene is a member of the ADAR (adenosine deaminase acting on RNA) family. Using site-specific adenosine modification, proteins encoded by these genes participate in the pre-mRNA editing of nuclear transcripts. The protein encoded by this gene, tRNA-specific adenosine deaminase 1, is responsible for the deamination of adenosine 37 to inosine in eukaryotic tRNA. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:111966908-111992302
Strand Reverse strand
Band E1
Transcripts
ENSMUST00000034427 ENSMUSP00000034427
ENSMUST00000120457 ENSMUSP00000113201
ENSMUST00000139820 ENSMUSP00000117279
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0004000 adenosine deaminase activity
GO:0008251 tRNA-specific adenosine deaminase activity
GO:0046872 metal ion binding
Biological Process
GO:0006396 RNA processing
GO:0008033 tRNA processing
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000065457
View Gene Order
ENSBTAG00000015669
Not yet available
Cross-References
SwissProt Q9JHI2
TrEMBL
UniProt Splice Variant
Entrez Gene 30947
UniGene Mm.282162
RefSeq NM_013925
OMIM
CCDS CCDS22684
HPRD
IMGT
MGI ID MGI:1353631
MGI Symbol Adat1
EMBL AF192367 AF192368 AF192369 AF192370 AF192371 AF192372 AF192373 AF192374 AF192375 AK035614 AK039699 AK082399 AK161044 BC019976
GenPept AAF36820 AAF36821 AAH19976 BAC29125 BAC30422 BAC38487 BAE36167
RNA Seq Atlas 30947

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca