Version 5.4
Mus musculus Gene: 1190005F20Rik
Summary
InnateDB Gene IDBG-198078.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol 1190005F20Rik
Gene Name RIKEN cDNA 1190005F20 gene
Synonyms 1190005F20Rik; AW226554; C1orf25; Trm1-like; Trm1l
Species Mus musculus
Ensembl Gene ENSMUSG00000053286
Encoded Proteins
IDBP-198080
RIKEN cDNA 1190005F20 gene
IDBP-789373
tRNA methyltransferase 1 like
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000121486:
This gene encodes a protein that has some similarity to N2,N2-dimethylguanosine tRNA methyltransferase from other organisms. Studies of the mouse ortholog have shown that this protein plays a role in motor coordination and exploratory behavior, and it may also be involved in modulating postnatal neuronal functions. Alternatively spliced transcripts have been identified for this gene. [provided by RefSeq, Jan 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:151428542-151458161
Strand Forward strand
Band G1
Transcripts
ENSMUST00000065625 ENSMUSP00000068309
ENSMUST00000188179
ENSMUST00000188679
ENSMUST00000188843
ENSMUST00000186244
ENSMUST00000185230
ENSMUST00000189655 ENSMUSP00000140009
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity
GO:0016740 transferase activity
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0008033 tRNA processing
GO:0008344 adult locomotory behavior
GO:0030488 tRNA methylation
GO:0030534 adult behavior
Cellular Component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000121486
View Gene Order
ENSBTAG00000011285
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_026876 XM_006529977
OMIM
CCDS CCDS15361
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca