Version 5.4
Homo sapiens Gene: RDH10
Summary
InnateDB Gene IDBG-25605.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RDH10
Gene Name retinol dehydrogenase 10 (all-trans)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000121039
Encoded Proteins
IDBP-25607
retinol dehydrogenase 10 (all-trans)
IDBP-480029
retinol dehydrogenase 10 (all-trans)
IDBP-479720
retinol dehydrogenase 10 (all-trans)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a retinol dehydrogenase, which converts all-trans-retinol to all-trans-retinal, with preference for NADP as a cofactor. Studies in mice suggest that this protein is essential for synthesis of embryonic retinoic acid and is required for limb, craniofacial, and organ development. [provided by RefSeq, Dec 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:73294612-73325281
Strand Forward strand
Band q21.11
Transcripts
ENST00000240285 ENSP00000240285
ENST00000518870
ENST00000521928 ENSP00000429727
ENST00000519380 ENSP00000428132
ENST00000521013
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0004745 retinol dehydrogenase activity
GO:0016491 oxidoreductase activity
GO:0052650 NADP-retinol dehydrogenase activity
Biological Process
GO:0001523 retinoid metabolic process
GO:0001656 metanephros development
GO:0001701 in utero embryonic development
GO:0002138 retinoic acid biosynthetic process
GO:0007601 visual perception
GO:0007603 phototransduction, visible light
GO:0008152 metabolic process
GO:0008406 gonad development
GO:0009887 organ morphogenesis
GO:0014032 neural crest cell development
GO:0031076 embryonic camera-type eye development
GO:0035115 embryonic forelimb morphogenesis
GO:0042572 retinol metabolic process
GO:0042574 retinal metabolic process
GO:0043583 ear development
GO:0043584 nose development
GO:0048568 embryonic organ development
GO:0048703 embryonic viscerocranium morphogenesis
GO:0055114 oxidation-reduction process
GO:0060431 primary lung bud formation
GO:0060449 bud elongation involved in lung branching
Cellular Component
GO:0005737 cytoplasm
GO:0005789 endoplasmic reticulum membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0044297 cell body
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000025921
View Gene Order
ENSBTAG00000020143
Not yet available
Pathways
NETPATH
REACTOME
REACT_160156
The canonical retinoid cycle in rods (twilight vision) pathway
REACT_111102
Signal Transduction pathway
REACT_160102
Diseases associated with visual transduction pathway
REACT_160125
Visual phototransduction pathway
REACT_116125
Disease pathway
KEGG
hsa00830
Retinol metabolism pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.244940 Hs.728605 Hs.730259
RefSeq NM_172037
HUGO
OMIM
CCDS CCDS6213
HPRD 07605
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca