InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Gene: SNRPF

Summary

InnateDB Gene

IDBG-51824.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SNRPF

Gene Name

small nuclear ribonucleoprotein polypeptide F

Synonyms

Sm-F; SMF; snRNP-F

Species

Homo sapiens

Ensembl Gene

ENSG00000139343

Encoded Proteins

IDBP-51826

small nuclear ribonucleoprotein polypeptide F

IDBP-600119

small nuclear ribonucleoprotein polypeptide F

IDBP-601451

small nuclear ribonucleoprotein polypeptide F

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.

Gene Information

Type

Protein coding

Genomic Location

Chromosome 12:95858928-95903828

Strand

Forward strand

Band

q23.1

Transcripts

ENST00000266735	ENSP00000266735
ENST00000551316
ENST00000553192	ENSP00000447751
ENST00000552085	ENSP00000447127
ENST00000549580

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 86 experimentally validated interaction(s) in this database.

Experimentally validated
Total	86 [view]
Protein-Protein	83 [view]
Protein-DNA	2 [view]
Protein-RNA	1 [view]
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003723	RNA binding
GO:0005515	protein binding

Biological Process

GO:0000387	spliceosomal snRNP assembly
GO:0000398	mRNA splicing, via spliceosome
GO:0006366	transcription from RNA polymerase II promoter
GO:0006369	termination of RNA polymerase II transcription
GO:0006396	RNA processing
GO:0008334	histone mRNA metabolic process
GO:0008380	RNA splicing
GO:0010467	gene expression
GO:0016070	RNA metabolic process
GO:0031124	mRNA 3'-end processing
GO:0034660	ncRNA metabolic process

Cellular Component

GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0005681	spliceosomal complex
GO:0005683	U7 snRNP
GO:0005685	U1 snRNP
GO:0005687	U4 snRNP
GO:0005689	U12-type spliceosomal complex
GO:0005829	cytosol
GO:0030532	small nuclear ribonucleoprotein complex
GO:0034709	methylosome
GO:0034715	pICln-Sm protein complex
GO:0034719	SMN-Sm protein complex
GO:0071013	catalytic step 2 spliceosome