Homo sapiens Gene: PODXL2
Summary
InnateDB Gene IDBG-54937.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PODXL2
Gene Name podocalyxin-like 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000114631
Encoded Proteins
podocalyxin-like 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is a member of the CD34 family of cell surface transmembrane proteins, which are characterized by an N-terminal extracellular mucin domain, globular and stalk domains, a single pass transmembrane region, and a charged cytoplasmic tail. The encoded protein is a ligand for vascular selectins. [provided by RefSeq, Oct 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:127629181-127672809
Strand Forward strand
Band q21.3
Transcripts
ENST00000342480 ENSP00000345359
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0005539 glycosaminoglycan binding
Biological Process
GO:0050901 leukocyte tethering or rolling
Cellular Component
GO:0005887 integral component of plasma membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Cross-References
SwissProt Q9NZ53
TrEMBL
UniProt Splice Variant
Entrez Gene 50512
UniGene Hs.591290
RefSeq NM_015720
HUGO HGNC:17936
OMIM
CCDS CCDS3044
HPRD
IMGT
EMBL AF219137 AY359096 BC019330 BC052585
GenPept AAF44629 AAH19330 AAH52585 AAQ89454
RNA Seq Atlas 50512