Version 5.4
Homo sapiens Gene: ARID5A
Summary
InnateDB Gene IDBG-61762.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ARID5A
Gene Name AT rich interactive domain 5A (MRF1-like)
Synonyms MRF-1; MRF1; RP11-363D14
Species Homo sapiens
Ensembl Gene ENSG00000196843
Encoded Proteins
IDBP-61764
AT rich interactive domain 5A (MRF1-like)
IDBP-382959
AT rich interactive domain 5A (MRF1-like)
IDBP-382965
AT rich interactive domain 5A (MRF1-like)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Members of the ARID protein family, including ARID5A, have diverse functions but all appear to play important roles in development, tissue-specific gene expression, and regulation of cell growth (Patsialou et al., 2005 [PubMed 15640446]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:96536743-96552638
Strand Forward strand
Band q11.2
Transcripts
ENST00000357485 ENSP00000350078
ENST00000412735 ENSP00000397286
ENST00000454558 ENSP00000400785
ENST00000470579
ENST00000467498
ENST00000497920
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
Experimentally validated
Total 10 [view]
Protein-Protein 10 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0005515 protein binding
GO:0008134 transcription factor binding
Biological Process
GO:0002062 chondrocyte differentiation
GO:0006351 transcription, DNA-templated
GO:0035066 positive regulation of histone acetylation
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005667 transcription factor complex
GO:0005730 nucleolus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000037447
View Gene Order
ENSBTAG00000014090
Not yet available
Cross-References
SwissProt
TrEMBL C9J1Q0
UniProt Splice Variant
Entrez Gene 10865
UniGene Hs.920
RefSeq NM_212481 XM_005263860 XM_005263861 XM_006712202
HUGO HGNC:17361
OMIM 611583
CCDS CCDS33251
HPRD 12481
IMGT
EMBL AC013270 CH471207
GenPept EAW71359
RNA Seq Atlas 10865

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca