Homo sapiens Gene: VMP1
Summary
InnateDB Gene IDBG-61820.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol VMP1
Gene Name vacuole membrane protein 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000062716
Encoded Proteins
vacuole membrane protein 1
vacuole membrane protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:59707192-59842255
Strand Forward strand
Band q23.1
Transcripts
ENST00000262291 ENSP00000262291
ENST00000536180 ENSP00000444969
ENST00000587470
ENST00000588915
ENST00000588131
ENST00000585847 ENSP00000465947
ENST00000588617
ENST00000591782
ENST00000586245 ENSP00000466579
ENST00000592790
ENST00000592106 ENSP00000467093
ENST00000591877 ENSP00000467350
ENST00000587259 ENSP00000465397
ENST00000591315 ENSP00000466511
ENST00000593168 ENSP00000465972
ENST00000587945 ENSP00000466413
ENST00000589823 ENSP00000466198
ENST00000592619 ENSP00000465911
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0006914 autophagy
GO:0007566 embryo implantation
GO:0010506 regulation of autophagy
GO:0016337 single organismal cell-cell adhesion
GO:0034329 cell junction assembly
Cellular Component
GO:0000407 pre-autophagosomal structure
GO:0000421 autophagic vacuole membrane
GO:0005783 endoplasmic reticulum
GO:0005886 plasma membrane
GO:0016021 integral component of membrane
GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.444569 Hs.597147 Hs.612262 Hs.734951 Hs.743288
RefSeq NM_030938
HUGO
OMIM
CCDS CCDS11619
HPRD 15649
IMGT
EMBL
GenPept
RNA Seq Atlas