Version 5.4
Bos taurus Gene: BT.89866
Summary
InnateDB Gene IDBG-628708.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.89866
Gene Name chromodomain helicase DNA binding protein 2
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000017776
Encoded Proteins
IDBP-680130
chromodomain helicase DNA binding protein 2
IDBP-680136
chromodomain helicase DNA binding protein 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000173575:
The CHD family of proteins is characterized by the presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 21:14390575-14483806
Strand Reverse strand
Band
Transcripts
ENSBTAT00000065179 ENSBTAP00000054394
ENSBTAT00000023638 ENSBTAP00000023638
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001046 core promoter sequence-specific DNA binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0042393 histone binding
Biological Process
GO:0006974 cellular response to DNA damage stimulus
GO:0007517 muscle organ development
GO:0008152 metabolic process
GO:0060218 hematopoietic stem cell differentiation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000173575
View Gene Order
ENSMUSG00000078671
View Gene Order
Cross-References
SwissProt
TrEMBL F6Q0D1
UniProt Splice Variant
Entrez Gene 535026
UniGene Bt.103298 Bt.10703 Bt.107599 Bt.89866
RefSeq NM_001102181 XM_005196226
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02051958
GenPept
RNA Seq Atlas 100847962 535026

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca