Version 5.4
Bos taurus Gene: MAP1LC3B
Summary
InnateDB Gene IDBG-630234.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol MAP1LC3B
Gene Name Microtubule-associated proteins 1A/1B light chain 3B
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000011632
Encoded Proteins
IDBP-681671
Microtubule-associated proteins 1A/1B light chain 3B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000140941:
The product of this gene is a subunit of neuronal microtubule-associated MAP1A and MAP1B proteins, which are involved in microtubule assembly and important for neurogenesis. Studies on the rat homolog implicate a role for this gene in autophagy, a process that involves the bulk degradation of cytoplasmic component. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 18:13017744-13031053
Strand Forward strand
Band
Transcripts
ENSBTAT00000015449 ENSBTAP00000015449
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 100 interaction(s) predicted by orthology.
Predicted by orthology
Total 100 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0000045 autophagic vacuole assembly
GO:0006914 autophagy
Cellular Component
GO:0000421 autophagic vacuole membrane
GO:0005737 cytoplasm
GO:0005776 autophagic vacuole
GO:0005856 cytoskeleton
GO:0005874 microtubule
GO:0005930 axoneme
GO:0012505 endomembrane system
GO:0016020 membrane
GO:0031090 organelle membrane
GO:0031410 cytoplasmic vesicle
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000140941
View Gene Order
ENSMUSG00000031812
View Gene Order
Cross-References
SwissProt O41515
TrEMBL
UniProt Splice Variant
Entrez Gene 408001
UniGene Bt.64566 Bt.88486
RefSeq NM_001001169
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL AY570553 BC102891 U80885
GenPept AAB72082 AAI02892 AAS78585
RNA Seq Atlas 408001

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca