Bos taurus Gene: VCL | |||||||||||||||||||||
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Summary | |||||||||||||||||||||
InnateDB Gene | IDBG-630608.3 | ||||||||||||||||||||
Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||||||||
Gene Symbol | VCL | ||||||||||||||||||||
Gene Name | vinculin | ||||||||||||||||||||
Synonyms | |||||||||||||||||||||
Species | Bos taurus | ||||||||||||||||||||
Ensembl Gene | ENSBTAG00000021879 | ||||||||||||||||||||
Encoded Proteins |
Uncharacterized protein
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Protein Structure | |||||||||||||||||||||
Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||||||||
Entrez Gene | |||||||||||||||||||||
Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000035403:
Vinculin is a cytoskeletal protein associated with cell-cell and cell-matrix junctions, where it is thought to function as one of several interacting proteins involved in anchoring F-actin to the membrane. Defects in VCL are the cause of cardiomyopathy dilated type 1W. Dilated cardiomyopathy is a disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Multiple alternatively spliced transcript variants have been found for this gene, but the biological validity of some variants has not been determined. [provided by RefSeq, Jul 2008] |
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Gene Information | |||||||||||||||||||||
Type | Protein coding | ||||||||||||||||||||
Genomic Location | Chromosome 28:30053806-30166317 | ||||||||||||||||||||
Strand | Forward strand | ||||||||||||||||||||
Band | |||||||||||||||||||||
Transcripts |
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Interactions | |||||||||||||||||||||
Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 136 interaction(s) predicted by orthology.
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Gene Ontology | |||||||||||||||||||||
Molecular Function |
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Biological Process |
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Cellular Component |
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Orthologs | |||||||||||||||||||||
Species
Homo sapiens
Mus musculus
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Gene ID
Gene Order
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Pathway Predictions based on Human Orthology Data | |||||||||||||||||||||
NETPATH |
EGFR1 pathway
IL3 pathway
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REACTOME |
Platelet degranulation pathway
Response to elevated platelet cytosolic Ca2+ pathway
Smooth Muscle Contraction pathway
Platelet activation, signaling and aggregation pathway
Muscle contraction pathway
Hemostasis pathway
Platelet degranulation pathway
Hemostasis pathway
Smooth Muscle Contraction pathway
Platelet activation, signaling and aggregation pathway
Muscle contraction pathway
Response to elevated platelet cytosolic Ca2+ pathway
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KEGG |
Regulation of actin cytoskeleton pathway
Adherens junction pathway
Leukocyte transendothelial migration pathway
Focal adhesion pathway
Amoebiasis pathway
Bacterial invasion of epithelial cells pathway
Shigellosis pathway
Regulation of actin cytoskeleton pathway
Adherens junction pathway
Leukocyte transendothelial migration pathway
Focal adhesion pathway
Amoebiasis pathway
Bacterial invasion of epithelial cells pathway
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INOH |
Integrin signaling pathway pathway
Integrin signaling pathway pathway
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PID NCI |
Integrins in angiogenesis
Signaling events mediated by focal adhesion kinase
Signaling events mediated by VEGFR1 and VEGFR2
RhoA signaling pathway
Stabilization and expansion of the E-cadherin adherens junction
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Cross-References | |||||||||||||||||||||
SwissProt | |||||||||||||||||||||
TrEMBL | F1N789 Q0VCE6 Q2PQT6 | ||||||||||||||||||||
UniProt Splice Variant | |||||||||||||||||||||
Entrez Gene | 783645 | ||||||||||||||||||||
UniGene | Bt.111207 Bt.37667 | ||||||||||||||||||||
RefSeq | NM_001191370 XM_005226481 | ||||||||||||||||||||
HUGO | |||||||||||||||||||||
OMIM | |||||||||||||||||||||
CCDS | |||||||||||||||||||||
HPRD | |||||||||||||||||||||
IMGT | |||||||||||||||||||||
EMBL | BC120206 DAAA02061908 DQ306921 | ||||||||||||||||||||
GenPept | AAI20207 ABC25001 | ||||||||||||||||||||
RNA Seq Atlas | 783645 | ||||||||||||||||||||