InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Gene: BT.69347

Summary

InnateDB Gene

IDBG-631922.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

BT.69347

Gene Name

72 kDa type IV collagenase precursor

Synonyms

Species

Bos taurus

Ensembl Gene

ENSBTAG00000019267

Encoded Proteins

IDBP-683503

72 kDa type IV collagenase precursor

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000087245:
Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as arthritis and metastasis. Most MMP's are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases. This gene encodes an enzyme which degrades type IV collagen, the major structural component of basement membranes. The enzyme plays a role in endometrial menstrual breakdown, regulation of vascularization and the inflammatory response. Mutations in this gene have been associated with Winchester syndrome and Nodulosis-Arthropathy-Osteolysis (NAO) syndrome. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as arthritis and metastasis. Most MMP\'s are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases. This gene encodes an enzyme which degrades type IV collagen, the major structural component of basement membranes. The enzyme plays a role in endometrial menstrual breakdown, regulation of vascularization and the inflammatory response. Mutations in this gene have been associated with Winchester syndrome and Nodulosis-Arthropathy-Osteolysis (NAO) syndrome. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Gene Information

Type

Protein coding

Genomic Location

Chromosome 18:23828638-23855657

Strand

Forward strand

Band

Transcripts

ENSBTAT00000025657

ENSBTAP00000025657

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 23 interaction(s) predicted by orthology.

Predicted by orthology
Total	23 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0004222	metalloendopeptidase activity
GO:0005515	protein binding
GO:0008233	peptidase activity
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding
GO:0016787	hydrolase activity
GO:0046872	metal ion binding

Biological Process

GO:0001666	response to hypoxia
GO:0001955	blood vessel maturation
GO:0001957	intramembranous ossification
GO:0006508	proteolysis
GO:0007566	embryo implantation
GO:0030574	collagen catabolic process
GO:0045089	positive regulation of innate immune response
GO:0048705	skeletal system morphogenesis
GO:0060325	face morphogenesis
GO:0060346	bone trabecula formation
GO:0071230	cellular response to amino acid stimulus