Version 5.4
Bos taurus Gene: BT.58955
Summary
InnateDB Gene IDBG-632093.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.58955
Gene Name lys-63-specific deubiquitinase BRCC36
Synonyms CXorf53
Species Bos taurus
Ensembl Gene ENSBTAG00000007817
Encoded Proteins
IDBP-683701
lys-63-specific deubiquitinase BRCC36
IDBP-683702
lys-63-specific deubiquitinase BRCC36
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000185515:
This gene encodes a subunit of the BRCA1-BRCA2-containing complex (BRCC), which is an E3 ubiquitin ligase. This complex plays a role in the DNA damage response, where it is responsible for the stable accumulation of BRCA1 at DNA break sites. The component encoded by this gene can specifically cleave Lys 63-linked polyubiquitin chains, and it regulates the abundance of these polyubiquitin chains in chromatin. The loss of this gene results in abnormal angiogenesis and is associated with syndromic moyamoya, a cerebrovascular angiopathy. Alternative splicing results in multiple transcript variants. A related pseudogene has been identified on chromosome 5. [provided by RefSeq, Jun 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome X:38709695-38788194
Strand Reverse strand
Band
Transcripts
ENSBTAT00000010280 ENSBTAP00000010280
ENSBTAT00000057143 ENSBTAP00000050254
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 32 interaction(s) predicted by orthology.
Predicted by orthology
Total 32 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004221 ubiquitin thiolesterase activity
GO:0004843 ubiquitin-specific protease activity
GO:0005515 protein binding
GO:0008237 metallopeptidase activity
GO:0030234 enzyme regulator activity
GO:0031593 polyubiquitin binding
Biological Process
GO:0006302 double-strand break repair
GO:0010165 response to X-ray
GO:0010212 response to ionizing radiation
GO:0031572 G2 DNA damage checkpoint
GO:0045739 positive regulation of DNA repair
GO:0050790 regulation of catalytic activity
GO:0070536 protein K63-linked deubiquitination
GO:0070537 histone H2A K63-linked deubiquitination
Cellular Component
GO:0000151 ubiquitin ligase complex
GO:0000152 nuclear ubiquitin ligase complex
GO:0005634 nucleus
GO:0070531 BRCA1-A complex
GO:0070552 BRISC complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000185515
View Gene Order
ENSMUSG00000031201
View Gene Order
Cross-References
SwissProt
TrEMBL G3X874 G5E595
UniProt Splice Variant
Entrez Gene 519513
UniGene Bt.58955
RefSeq NM_001075790 XM_005227647 XM_005227649
HUGO HGNC:24185
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02070022 DAAA02070023 DAAA02070024 DAAA02070025
GenPept
RNA Seq Atlas 519513

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca