Version 5.4
Bos taurus Gene: BT.96645
Summary
InnateDB Gene IDBG-646472.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.96645
Gene Name nidogen-2 precursor
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000021945
Encoded Proteins
IDBP-699283
nidogen 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000087303:
This gene encodes a member of the nidogen family of basement membrane proteins. This protein is a cell-adhesion protein that binds collagens I and IV and laminin and may be involved in maintaining the structure of the basement membrane.[provided by RefSeq, Jun 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:44894657-44986659
Strand Reverse strand
Band
Transcripts
ENSBTAT00000029257 ENSBTAP00000029257
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007160 cell-matrix adhesion
Cellular Component
GO:0005576 extracellular region
GO:0005578 proteinaceous extracellular matrix
GO:0005604 basement membrane
GO:0031012 extracellular matrix
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000087303
View Gene Order
ENSMUSG00000021806
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_118779
Extracellular matrix organization pathway
REACT_169262
Laminin interactions pathway
REACT_206066
Extracellular matrix organization pathway
REACT_202342
Laminin interactions pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL F1MF97
UniProt Splice Variant
Entrez Gene 521854
UniGene Bt.16087 Bt.96645
RefSeq NM_001102065
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02028722 DAAA02028723
GenPept
RNA Seq Atlas 521854

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca