Homo sapiens Gene: SEC16A
Summary
InnateDB Gene IDBG-92412.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SEC16A
Gene Name SEC16 homolog A (S. cerevisiae)
Synonyms KIAA0310; p250; SEC16L;
Species Homo sapiens
Ensembl Gene ENSG00000148396
Encoded Proteins
SEC16 homolog A (S. cerevisiae)
SEC16 homolog A (S. cerevisiae)
SEC16 homolog A (S. cerevisiae)
SEC16 homolog A (S. cerevisiae)
SEC16 homolog A (S. cerevisiae)
SEC16 homolog A (S. cerevisiae)
SEC16 homolog A (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a protein that forms part of the Sec16 complex. This protein has a role in protein transport from the endoplasmic reticulum (ER) to the Golgi and mediates COPII vesicle formation at the transitional ER. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Feb 2013]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:136440096-136483759
Strand Reverse strand
Band q34.3
Transcripts
ENST00000313084 ENSP00000317437
ENST00000313050 ENSP00000325827
ENST00000290037 ENSP00000290037
ENST00000371706 ENSP00000360771
ENST00000277537 ENSP00000277537
ENST00000431893 ENSP00000387583
ENST00000453963 ENSP00000403525
ENST00000467838
ENST00000472305
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 41 experimentally validated interaction(s) in this database.
Experimentally validated
Total 41 [view]
Protein-Protein 41 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0007029 endoplasmic reticulum organization
GO:0015031 protein transport
GO:0021762 substantia nigra development
GO:0048208 COPII vesicle coating
Cellular Component
GO:0000139 Golgi membrane
GO:0005737 cytoplasm
GO:0005789 endoplasmic reticulum membrane
GO:0005794 Golgi apparatus
GO:0005829 cytosol
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Pathways
NETPATH
TNFalpha pathway
REACTOME
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.522500 Hs.602836
RefSeq NM_001276418 NM_014866 XM_005266132 XM_005266136
HUGO
OMIM
CCDS CCDS55351 CCDS75936
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas