Homo sapiens Gene: RNF220
Summary
InnateDB Gene IDBG-97708.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RNF220
Gene Name ring finger protein 220
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000187147
Encoded Proteins
ring finger protein 220
ring finger protein 220
ring finger protein 220
ring finger protein 220
ring finger protein 220
ring finger protein 220
ring finger protein 220
ring finger protein 220
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:44405194-44651724
Strand Forward strand
Band p34.1
Transcripts
ENST00000355387 ENSP00000347548
ENST00000361799 ENSP00000354872
ENST00000372247 ENSP00000361321
ENST00000335497 ENSP00000335580
ENST00000443020 ENSP00000414640
ENST00000453863 ENSP00000411541
ENST00000440132 ENSP00000388533
ENST00000487332
ENST00000470498
ENST00000496262
ENST00000474064
ENST00000471494
ENST00000488865 ENSP00000475383
ENST00000497469
ENST00000475378
ENST00000484745
ENST00000474394
ENST00000480686
ENST00000474956
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
Biological Process
GO:0016567 protein ubiquitination
GO:0051865 protein autoubiquitination
Cellular Component
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
Adaptive Immune System pathway
Immune System pathway
Antigen processing: Ubiquitination & Proteasome degradation pathway
Class I MHC mediated antigen processing & presentation pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt
TrEMBL B4DJE2 Q5TDE8
UniProt Splice Variant
Entrez Gene 55182
UniGene Hs.456557 Hs.681213 Hs.681897
RefSeq NM_018150 XM_005270994
HUGO HGNC:25552
OMIM
CCDS CCDS510
HPRD 13336
IMGT
EMBL AK296038 AL122004 AL359373 AL596225
GenPept BAG58804
RNA Seq Atlas 55182