Version 5.4
Homo sapiens Gene: SSBP3
Summary
InnateDB Gene IDBG-98972.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SSBP3
Gene Name single stranded DNA binding protein 3
Synonyms CSDP; SSDP; SSDP1;
Species Homo sapiens
Ensembl Gene ENSG00000157216
Encoded Proteins
IDBP-98974
single stranded DNA binding protein 3
IDBP-98976
single stranded DNA binding protein 3
IDBP-98978
single stranded DNA binding protein 3
IDBP-384674
single stranded DNA binding protein 3
IDBP-384677
single stranded DNA binding protein 3
IDBP-583352
single stranded DNA binding protein 3
IDBP-810495
single stranded DNA binding protein 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:54225432-54413479
Strand Reverse strand
Band p32.3
Transcripts
ENST00000371320 ENSP00000360371
ENST00000357475 ENSP00000350067
ENST00000371319 ENSP00000360370
ENST00000326956
ENST00000426150
ENST00000444533 ENSP00000405880
ENST00000417664 ENSP00000414361
ENST00000420121
ENST00000448572
ENST00000528930
ENST00000533946
ENST00000530618
ENST00000533209
ENST00000525990 ENSP00000431654
ENST00000528787
ENST00000610401 ENSP00000479674
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
They are also associated with 29 interaction(s) predicted by orthology.
Experimentally validated
Total 15 [view]
Protein-Protein 15 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 29 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003697 single-stranded DNA binding
GO:0005515 protein binding
Biological Process
GO:0002244 hematopoietic progenitor cell differentiation
GO:0006351 transcription, DNA-templated
GO:0006461 protein complex assembly
GO:0008284 positive regulation of cell proliferation
GO:0021501 prechordal plate formation
GO:0021547 midbrain-hindbrain boundary initiation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0060322 head development
GO:0060323 head morphogenesis
GO:2000744 positive regulation of anterior head development
Cellular Component
GO:0005634 nucleus
GO:0043234 protein complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
ENSMUSG00000061887
View Gene Order
Ortholuge
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
ENSBTAG00000010717
Not yet available
Ortholuge
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.658676 Hs.733025
RefSeq NM_001009955 NM_018070 NM_145716
HUGO
OMIM
CCDS CCDS30726 CCDS590 CCDS591
HPRD 09578
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca