Version 5.4
Mus musculus Gene: Snx10
Summary
InnateDB Gene IDBG-147521.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snx10
Gene Name sorting nexin 10
Synonyms 2410004M09Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000038301
Encoded Proteins
IDBP-147523
sorting nexin 10
IDBP-251757
sorting nexin 10
IDBP-534108
sorting nexin 10
IDBP-531617
sorting nexin 10
IDBP-788069
sorting nexin 10
IDBP-715581
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000086300:
This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled coil region, like some family members. This gene may play a role in regulating endosome homeostasis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:51523901-51590679
Strand Forward strand
Band B3
Transcripts
ENSMUST00000049152 ENSMUSP00000044165
ENSMUST00000114439 ENSMUSP00000110082
ENSMUST00000155724
ENSMUST00000140560 ENSMUSP00000122639
ENSMUST00000137212 ENSMUSP00000117914
ENSMUST00000149024 ENSMUSP00000138139
ENSMUST00000179365 ENSMUSP00000136974
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 0
Protein-DNA 3 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005545 1-phosphatidylinositol binding
GO:0035091 phosphatidylinositol binding
GO:0051117 ATPase binding
Biological Process
GO:0006886 intracellular protein transport
GO:0007032 endosome organization
GO:0030316 osteoclast differentiation
GO:0042384 cilium assembly
GO:0061512 protein localization to cilium
GO:0071539 protein localization to centrosome
Cellular Component
GO:0005634 nucleus
GO:0005768 endosome
GO:0005783 endoplasmic reticulum
GO:0005813 centrosome
GO:0031313 extrinsic component of endosome membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000086300
View Gene Order
ENSBTAG00000001822
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.489698
RefSeq NM_001127348 NM_001127349 NM_028035 XM_006506653
OMIM
CCDS CCDS20136
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca