Mus musculus Gene: Efnb1
Summary
InnateDB Gene IDBG-161815.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Efnb1
Gene Name ephrin B1
Synonyms Cek5-L; EFL-3; Elk-L; Epl2; Eplg2; LERK-2; Lerk2; Stra1
Species Mus musculus
Ensembl Gene ENSMUSG00000031217
Encoded Proteins
ephrin B1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000090776:
The protein encoded by this gene is a type I membrane protein and a ligand of Eph-related receptor tyrosine kinases. It may play a role in cell adhesion and function in the development or maintenance of the nervous system. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome X:99136130-99148991
Strand Forward strand
Band C3
Transcripts
ENSMUST00000052839 ENSMUSP00000050716
ENSMUST00000151750
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 17 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 17 [view]
Protein-Protein 17 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0046875 ephrin receptor binding
Biological Process
GO:0001755 neural crest cell migration
GO:0007411 axon guidance
GO:0009880 embryonic pattern specification
GO:0042102 positive regulation of T cell proliferation
GO:0048013 ephrin receptor signaling pathway
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0045121 membrane raft
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Not yet available
Pathways
NETPATH
REACTOME
EPH-ephrin mediated repulsion of cells pathway
EPH-Ephrin signaling pathway
EPHB-mediated forward signaling pathway
Axon guidance pathway
Developmental Biology pathway
Ephrin signaling pathway
KEGG
Axon guidance pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
Developmental Biology pathway
EPHB-mediated forward signaling pathway
Axon guidance pathway
Ephrin signaling pathway
EPH-ephrin mediated repulsion of cells pathway
EPH-Ephrin signaling pathway
KEGG
Axon guidance pathway
INOH
PID NCI
EPHB forward signaling
Ephrin B reverse signaling
EphrinB-EPHB pathway
Cross-References
SwissProt P52795
TrEMBL Q544L9
UniProt Splice Variant
Entrez Gene 13641
UniGene Mm.3374
RefSeq NM_010110
OMIM
CCDS CCDS30298
HPRD
IMGT
MGI ID MGI:102708
MGI Symbol Efnb1
EMBL AK034996 BC006797 BC021656 CH466564 U07598 U07599 U07600 U07602 U12983 Z48781
GenPept AAA53231 AAC53247 AAH06797 AAH21656 BAC28907 CAA88695 EDL14195 EDL14196
RNA Seq Atlas 13641