Homo sapiens Gene: ATG13
Summary
InnateDB Gene IDBG-41852.6
Last Modified 2013-04-25 [Report errors or provide feedback]
Gene Symbol ATG13
Gene Name autophagy related 13
Synonyms KIAA0652; PARATARG8;
Species Homo sapiens
Ensembl Gene ENSG00000175224
Encoded Proteins
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
ATG13 autophagy related 13 homolog (S. cerevisiae)
Protein Structure
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11:46638826-46696368
Strand Forward strand
Band p11.2
Transcripts
ENST00000312040 ENSP00000310321
ENST00000359513 ENSP00000352500
ENST00000395549 ENSP00000378919
ENST00000434074 ENSP00000400642
ENST00000451945 ENSP00000404900
ENST00000529655 ENSP00000433756
ENST00000526715
ENST00000533325 ENSP00000436931
ENST00000530500 ENSP00000434390
ENST00000526508 ENSP00000431974
ENST00000524625 ENSP00000433543
ENST00000530942
ENST00000534610
ENST00000528494 ENSP00000432412
ENST00000526078 ENSP00000433052
ENST00000528145
ENST00000525850
ENST00000528984
ENST00000527907
ENST00000528704
ENST00000533316
ENST00000531933 ENSP00000434125
ENST00000525009 ENSP00000436174
ENST00000529395 ENSP00000431877
ENST00000532067 ENSP00000437191
ENST00000526485
ENST00000582547 ENSP00000464091
ENST00000577256 ENSP00000462167
ENST00000583249 ENSP00000463998
ENST00000581416 ENSP00000464274
ENST00000581438 ENSP00000463550
ENST00000579280
ENST00000578626 ENSP00000462644
ENST00000580238 ENSP00000463808
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 37 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 37 [view]
Protein-Protein 37 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0019901 protein kinase binding
Biological Process
GO:0000045 autophagic vacuole assembly
Cellular Component
GO:0000407 pre-autophagosomal structure
GO:0005829 cytosol
GO:0070969 ULK1-ATG13-FIP200 complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
KEGG
INOH
PID BIOCARTA
PID NCI
mTOR signaling pathway
Cross-References
SwissProt O75143
TrEMBL B4DFI4 B7Z9G0 E9PML6 E9PPR2 E9PQZ8 H0YCL5 H0YEM7 J3KRU6 J3KST9 J3QR16 J3QR83 J3QRL1 J9JIF6 Q53EN6
UniProt Splice Variant
Entrez Gene 9776
UniGene
RefSeq NM_001142673 NM_001205119 NM_001205120 NM_001205122 NM_014741
HUGO 29091
OMIM
CCDS CCDS44582 CCDS55760 CCDS55761 CCDS7921
HPRD 13809
IMGT
EMBL AB014552 AC115088 AC127035 AK023867 AK223603 AK294110 AK315925 BC001331 BC002378 BC006191 CH471064
GenPept AAH01331 AAH02378 AAH06191 BAA31627 BAB14707 BAD97323 BAG57445 BAH14296 EAW67985 EAW67986 EAW67987 EAW67988 EAW67989 EAW67990 EAW67991
ImmGen ATG13 (murine)
RNA Seq Atlas 9776