Homo sapiens Gene: ATG13

Summary
InnateDB Gene IDBG-41852.6
Last Modified 2013-04-25   [Report errors or provide feedback]
Gene Symbol ATG13
Gene Name autophagy related 13
Synonyms KIAA0652; PARATARG8
Species Homo sapiens
Ensembl Gene ENSG00000175224
Encoded Proteins
IDBP-41854 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-41856 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-239320 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-372582 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-372585 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-603003 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-602419 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-600223 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-585998 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-583816 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-597457 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-596551 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-601296 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-583804 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-587006 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-586040 ATG13 autophagy related 13 homolog (S. cerevisiae)
IDBP-719154
IDBP-718887
IDBP-718733
IDBP-719432
IDBP-719031
IDBP-719406
IDBP-719328
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11: 46638826-46696368
Strand Forward strand
Band p11.2
Transcripts
ENST00000312040  ENSP00000310321
ENST00000359513  ENSP00000352500
ENST00000395549  ENSP00000378919
ENST00000434074  ENSP00000400642
ENST00000451945  ENSP00000404900
ENST00000529655  ENSP00000433756
ENST00000526715 
ENST00000533325  ENSP00000436931
ENST00000530500  ENSP00000434390
ENST00000526508  ENSP00000431974
ENST00000524625  ENSP00000433543
ENST00000530942 
ENST00000534610 
ENST00000528494  ENSP00000432412
ENST00000526078  ENSP00000433052
ENST00000528145 
ENST00000525850 
ENST00000528984 
ENST00000527907 
ENST00000528704 
ENST00000533316 
ENST00000531933  ENSP00000434125
ENST00000525009  ENSP00000436174
ENST00000529395  ENSP00000431877
ENST00000532067  ENSP00000437191
ENST00000526485 
ENST00000582547  ENSP00000464091
ENST00000577256  ENSP00000462167
ENST00000583249  ENSP00000463998
ENST00000581416  ENSP00000464274
ENST00000581438  ENSP00000463550
ENST00000579280 
ENST00000578626  ENSP00000462644
ENST00000580238  ENSP00000463808
Interactions
Number of Interactions   This gene and/or its encoded proteins are associated with 37 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 37 [view]
Protein‑Protein  37
[view]
Protein‑DNA 0
Protein‑RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
 
Predicted by orthology
Total [view]
Gene Ontology
Accession GO Term
Molecular Function
GO:0005515 protein binding
GO:0019901 protein kinase binding
Biological Process
GO:0000045 autophagic vacuole assembly
Cellular Component
GO:0000407 pre-autophagosomal structure
GO:0005829 cytosol
GO:0070969 ULK1-ATG13-FIP200 complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID Gene Order Method Confidence Comments
ENSMUSG00000027244 Ortholuge SSD Ortholog Ortholog supports species divergence
ENSBTAG00000017325 Not yet available Ortholuge SSD Ortholog Ortholog supports species divergence
Pathways
NETPATH
REACTOME
KEGG
INOH
PID BIOCARTA
PID NCI
mtor_4pathway mTOR signaling pathway
Cross-References
SwissProt O75143 
TrEMBL B4DFI4 B7Z9G0 E9PML6 E9PPR2 E9PQZ8 H0YCL5 H0YEM7 J3KRU6 J3KST9 J3QR16 J3QR83 J3QRL1 J9JIF6 Q53EN6
UniProt Splice Variant
Entrez Gene 9776 
UniGene
RefSeq NM_001142673  NM_001205119  NM_001205120  NM_001205122  NM_014741 
HUGO 29091 
OMIM
CCDS CCDS44582  CCDS55760  CCDS55761  CCDS7921 
HPRD 13809
IMGT
EMBL AB014552 AC115088 AC127035 AK023867 AK223603 AK294110 AK315925 BC001331 BC002378 BC006191 CH471064
GenPept AAH01331  AAH02378  AAH06191  BAA31627  BAB14707  BAD97323  BAG57445  BAH14296  EAW67985  EAW67986  EAW67987  EAW67988  EAW67989  EAW67990  EAW67991 
ImmGen ATG13 (murine) 
RNA Seq Atlas 9776