Version 5.4
Homo sapiens Gene: LRRTM4
Summary
InnateDB Gene IDBG-58344.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LRRTM4
Gene Name leucine rich repeat transmembrane neuronal 4
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000176204
Encoded Proteins
IDBP-295447
leucine rich repeat transmembrane neuronal 4
IDBP-295449
leucine rich repeat transmembrane neuronal 4
IDBP-295446
leucine rich repeat transmembrane neuronal 4
IDBP-295448
leucine rich repeat transmembrane neuronal 4
IDBP-295445
leucine rich repeat transmembrane neuronal 4
IDBP-381121
leucine rich repeat transmembrane neuronal 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 2:76747719-77593319
Strand Reverse strand
Band p12
Transcripts
ENST00000409911 ENSP00000387228
ENST00000409884 ENSP00000387297
ENST00000409093 ENSP00000386357
ENST00000409282 ENSP00000386286
ENST00000409088 ENSP00000386236
ENST00000456154 ENSP00000408722
ENST00000491242
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0043395 heparan sulfate proteoglycan binding
Biological Process
GO:0072578 neurotransmitter-gated ion channel clustering
GO:0097113 alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering
GO:1901629 regulation of presynaptic membrane organization
Cellular Component
GO:0030054 cell junction
GO:0032281 alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045211 postsynaptic membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000052581
View Gene Order
ENSBTAG00000000374
Not yet available
Cross-References
SwissProt
TrEMBL C9JM64
UniProt Splice Variant
Entrez Gene 80059
UniGene Hs.285782
RefSeq NM_001134745 NM_001282924 NM_001282928 NM_024993
HUGO HGNC:19411
OMIM 610870
CCDS CCDS46346 CCDS46347 CCDS74530
HPRD 11288
IMGT
EMBL AC013408 AC013716 AC016758 AC068048 AC068616 AC079117 AC079146 AC079614 AC093650 AL353610
GenPept
RNA Seq Atlas 80059

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca