Version 5.4
Bos taurus Gene: SHANK1
Summary
InnateDB Gene IDBG-641202.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SHANK1
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000013107
Encoded Proteins
IDBP-693544
SH3 and multiple ankyrin repeat domains 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000161681:
Gene Information
Type Protein coding
Genomic Location Chromosome 18:57208106-57253991
Strand Reverse strand
Band
Transcripts
ENSBTAT00000050235 ENSBTAP00000046968
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 14 interaction(s) predicted by orthology.
Predicted by orthology
Total 14 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0030160 GKAP/Homer scaffold activity
GO:0035255 ionotropic glutamate receptor binding
Biological Process
GO:0007616 long-term memory
GO:0008306 associative learning
GO:0030534 adult behavior
GO:0032232 negative regulation of actin filament bundle assembly
GO:0035176 social behavior
GO:0035418 protein localization to synapse
GO:0042048 olfactory behavior
GO:0046959 habituation
GO:0050885 neuromuscular process controlling balance
GO:0050894 determination of affect
GO:0060013 righting reflex
GO:0060997 dendritic spine morphogenesis
GO:0071625 vocalization behavior
GO:2000311 regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity
GO:2000463 positive regulation of excitatory postsynaptic membrane potential
Cellular Component
GO:0005886 plasma membrane
GO:0008328 ionotropic glutamate receptor complex
GO:0016020 membrane
GO:0030425 dendrite
GO:0043005 neuron projection
GO:0043197 dendritic spine
GO:0045211 postsynaptic membrane
GO:0060076 excitatory synapse
GO:0097481 neuronal postsynaptic density
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000161681
View Gene Order
ENSMUSG00000038738
View Gene Order
Cross-References
SwissProt
TrEMBL G5E618
UniProt Splice Variant
Entrez Gene 518970
UniGene
RefSeq
HUGO HGNC:15474
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02047513 DAAA02047514 DAAA02047515 DAAA02047516 DAAA02047517 DAAA02047518 DAAA02047519
GenPept
RNA Seq Atlas 518970

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca