Mus musculus Gene: Kdm4d
Summary
InnateDB Gene IDBG-134411.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Kdm4d
Gene Name lysine (K)-specific demethylase 4D
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000053914
Encoded Proteins
lysine (K)-specific demethylase 4D
lysine (K)-specific demethylase 4D
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000186280:
Gene Information
Type Protein coding
Genomic Location Chromosome 9:14462548-14500482
Strand Reverse strand
Band A2
Transcripts
ENSMUST00000058796 ENSMUSP00000061632
ENSMUST00000115647 ENSMUSP00000111311
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 0
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0033169 histone H3-K9 demethylation
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005634 nucleus
GO:0072562 blood microparticle
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Pathways
NETPATH
REACTOME
Chromatin organization pathway
HDMs demethylate histones pathway
Chromatin modifying enzymes pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
HDMs demethylate histones pathway
Chromatin organization pathway
Chromatin modifying enzymes pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q3U2K5
TrEMBL Z4YLE9
UniProt Splice Variant
Entrez Gene 244694
UniGene Mm.240457
RefSeq NM_173433 XM_006510270 XM_006510271
OMIM
CCDS CCDS22822
HPRD
IMGT
MGI ID MGI:3606484
MGI Symbol Kdm4d
EMBL AK030020 AK155227 BC112372 CT485607
GenPept AAI12373 BAC26740 BAE33135 CAM15687 CAX15698
RNA Seq Atlas 244694