Version 5.4
Homo sapiens Gene: KDM4D
Summary
InnateDB Gene IDBG-68444.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol KDM4D
Gene Name lysine (K)-specific demethylase 4D
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000186280
Encoded Proteins
IDBP-68446
lysine (K)-specific demethylase 4D
IDBP-718708
IDBP-807563
lysine (K)-specific demethylase 4D
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11:94973681-94999518
Strand Forward strand
Band q21
Transcripts
ENST00000335080 ENSP00000334181
ENST00000536741 ENSP00000460897
ENST00000610872 ENSP00000482224
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0033169 histone H3-K9 demethylation
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005634 nucleus
GO:0072562 blood microparticle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000053914
View Gene Order
ENSBTAG00000001704
Not yet available
Pathways
NETPATH
REACTOME
REACT_228178
HDMs demethylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 55693
UniGene
RefSeq NM_018039
HUGO HGNC:25498
OMIM 609766
CCDS CCDS8302
HPRD
IMGT
EMBL AK001113 AK056162 AL137545 AP002383 BC074739 BC119010 BC122858 CH471065
GenPept AAH74739 AAI19011 AAI22859 BAA91508 BAG51636 CAB70803 EAW66952
RNA Seq Atlas 55693

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca