Version 5.4
Mus musculus Gene: Phf12
Summary
InnateDB Gene IDBG-202013.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Phf12
Gene Name PHD finger protein 12
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000037791
Encoded Proteins
IDBP-202015
PHD finger protein 12
IDBP-264699
PHD finger protein 12
IDBP-541374
PHD finger protein 12
IDBP-623391
PHD finger protein 12
IDBP-623393
PHD finger protein 12
IDBP-623395
PHD finger protein 12
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000109118:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:77982754-78030539
Strand Forward strand
Band B5
Transcripts
ENSMUST00000049167 ENSMUSP00000044990
ENSMUST00000108360 ENSMUSP00000103997
ENSMUST00000153428 ENSMUSP00000119390
ENSMUST00000141620
ENSMUST00000153747 ENSMUSP00000130741
ENSMUST00000131680 ENSMUSP00000127391
ENSMUST00000123662 ENSMUSP00000131016
ENSMUST00000125079
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001106 RNA polymerase II transcription corepressor activity
GO:0001222 transcription corepressor binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0035091 phosphatidylinositol binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0016580 Sin3 complex
GO:0017053 transcriptional repressor complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000109118
View Gene Order
ENSBTAG00000015976
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.274329
RefSeq NM_174852 XM_006533400 XM_006533401
OMIM
CCDS CCDS48855
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca