Version 5.4
Homo sapiens Gene: PHF12
Summary
InnateDB Gene IDBG-37869.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHF12
Gene Name PHD finger protein 12
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000109118
Encoded Proteins
IDBP-37871
PHD finger protein 12
IDBP-37873
PHD finger protein 12
IDBP-37875
PHD finger protein 12
IDBP-758466
IDBP-757760
IDBP-763590
IDBP-759758
IDBP-762778
IDBP-758728
IDBP-764152
IDBP-759500
IDBP-759305
IDBP-759604
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:28905250-28951771
Strand Reverse strand
Band q11.2
Transcripts
ENST00000332830 ENSP00000329933
ENST00000378879 ENSP00000368157
ENST00000268756 ENSP00000268756
ENST00000483934
ENST00000584822 ENSP00000465374
ENST00000582655
ENST00000583524 ENSP00000463900
ENST00000582853 ENSP00000467091
ENST00000579563
ENST00000589176 ENSP00000465255
ENST00000584685 ENSP00000465017
ENST00000579036 ENSP00000467363
ENST00000578900 ENSP00000468478
ENST00000584236 ENSP00000466695
ENST00000577226 ENSP00000465161
ENST00000583747 ENSP00000467921
ENST00000582436
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 10 [view]
Protein-Protein 10 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001106 RNA polymerase II transcription corepressor activity
GO:0001222 transcription corepressor binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0035091 phosphatidylinositol binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-templated
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0016580 Sin3 complex
GO:0017053 transcriptional repressor complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000037791
View Gene Order
ENSBTAG00000015976
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.444173 Hs.743552
RefSeq NM_001033561 NM_001290131 NM_020889 XM_005258015 XM_005258016
HUGO
OMIM
CCDS CCDS11247 CCDS32598
HPRD 15123
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca