Version 5.4
Mus musculus Gene: Trim71
Summary
InnateDB Gene IDBG-257318.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trim71
Gene Name tripartite motif-containing 71
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000079259
Encoded Proteins
IDBP-257320
tripartite motif-containing 71
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
PMID 23438823
[Homo sapiens] TRIM71 was identified in a systematic screen for positive regulators of innate immune responses.
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000206557:
Gene Information
Type Protein coding
Genomic Location Chromosome 9:114507133-114564369
Strand Reverse strand
Band F3
Transcripts
ENSMUST00000111816 ENSMUSP00000107447
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
Experimentally validated
Total 15 [view]
Protein-Protein 14 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
GO:0035198 miRNA binding
Biological Process
GO:0000082 G1/S transition of mitotic cell cycle
GO:0001843 neural tube closure
GO:0008543 fibroblast growth factor receptor signaling pathway
GO:0010586 miRNA metabolic process
GO:0021915 neural tube development
GO:0035278 negative regulation of translation involved in gene silencing by miRNA
GO:0051246 regulation of protein metabolic process
GO:0051865 protein autoubiquitination
GO:0060964 regulation of gene silencing by miRNA
GO:0071310 cellular response to organic substance
GO:0072089 stem cell proliferation
GO:2000177 regulation of neural precursor cell proliferation
GO:2000637 positive regulation of gene silencing by miRNA
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005622 intracellular
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000206557
View Gene Order
ENSBTAG00000022744
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.17857
RefSeq NM_001042503
OMIM
CCDS CCDS40793
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca